Rosalind — Bioinformatics Armory

The Rosalind Bioinformatics Armory, all 15 problems: 14 solved and one partial. See the problem list.

15 problems — 14 solved, 1 partial. 13 carry assertions that run on every commit; 3 need a network connection and are checked separately. Press Run on any block to execute it in your browser, or open the whole pack in the workbench.

Take it with you: download this page as a notebook (.bln — run it with bl notebook, or export it to HTML, PDF or Jupyter), every problem as a zip, or grab a single problem with the Download .bl link in its section.

Sections

Or read every problem on a single page — heavier to load, but one place to scroll, search and print.

Every problem

Problem Title Status Section Runs in Checked
INI Introduction to the Bioinformatics Armory solved Sequence browser + CLI verified by bl test
GBK GenBank Introduction solved Databases browser + CLI — online needs NCBI
FRMT Data Formats solved Databases browser + CLI — online needs NCBI
MEME New Motif Discovery partial Motifs browser + CLI verified by bl test
NEED Pairwise Global Alignment solved Alignment browser + CLI — online verified by bl test
TFSQ FASTQ format introduction solved Fastq browser + CLI verified by bl test
PHRE Read Quality Distribution solved Fastq browser + CLI verified by bl test
PTRA Protein Translation solved Translation browser + CLI verified by bl test
FILT Read Filtration by Quality solved Fastq browser + CLI verified by bl test
RVCO Complementing a Strand of DNA solved Sequence browser + CLI verified by bl test
SUBO Suboptimal Local Alignment solved Alignment browser + CLI verified by bl test
BPHR Base Quality Distribution solved Fastq browser + CLI verified by bl test
CLUS Global Multiple Alignment solved Alignment browser + CLI verified by bl test
ORFR Finding Genes with ORFs solved Orf browser + CLI verified by bl test
BFIL Base Filtration by Quality solved Fastq browser + CLI verified by bl test